Description
RSeQC package provides a number of useful modules that can comprehensively evaluate high throughput sequence data especially RNA-seq data.
Th Basic modules allows you to quickly inspect sequence quality, nucleotide composition bias, PCR bias and GC bias.
The RNA-seq specific modules allows you to investigate sequencing saturation status of both splicing junction detection and expression estimation, mapped reads clipping profile, mapped reads distribution, reproducibility, coverage uniformity over gene body, strand specificity and splice junction annotation.
RSeQC is cross-platform and it works on Mac OS X, Windows and Linux.
Detailed instructions on how to install and use the RSeQC utility on your Mac are available HERE.
User Reviews for RSeQC FOR MAC 1
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for RSeQC FOR MAC
RSeQC FOR MAC provides comprehensive evaluation of RNA-seq data with modules for sequence quality, GC bias, splicing junction detection. Essential for genomics analysis.