Description
ChIP-Seq Tool Set is an easy to use application that allows you to analyze and compare ChIP-Seq data.
Determines statistically significant peaks from ChIP experiments sequenced by an Illumina Genome Analyzer (ChIP-Seq).
Includes several secondary background models from which to choose or an option to enter your own input file, for determining significance over a cell type-specific background.
It determines duplication and deletion events within the cell type of interest, as well as regions of sequence bias, and normalized the ChIP-seq sample. Peak height cutoff is determined based on a user-defined FDR.
A new option allows the user to more easily and accurately determine regions of histone modifications.
Output from the Illumina Genome Analyzer is processed. Software produces run statistics, visualization files of raw data, and a significant peaks file.
User Reviews for ChIP-Seq Tool Set FOR MAC 1
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for ChIP-Seq Tool Set FOR MAC
ChIP-Seq Tool Set FOR MAC is a powerful tool for analyzing ChIP-Seq data. The option to enter custom input files is a standout feature.